Detailed information of Aala_g286.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8037538.1, hypothetical protein HOLleu_18375 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D2Y5Sorting nexin-20 OS=Mus musculus OX=10090 GN=Snx20 PE=1 SV=2
Q5BK61Sorting nexin-20 OS=Rattus norvegicus OX=10116 GN=Snx20 PE=1 SV=1
Q2T9W1Sorting nexin-20 OS=Bos taurus OX=9913 GN=SNX20 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00787PXPX domainDomainInterproscan
PF00493MCMMCM P-loop domainDomainInterproscan
PF17855MCM_lidMCM AAA-lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR039937FamilySorting nexin SNX20/SNX21Interproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR001683DomainPhox homologyInterproscan
IPR001507DomainZona pellucida domainInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001208DomainMCM domainInterproscan
IPR041562DomainMCM, AAA-lid domainInterproscan
IPR031327FamilyMini-chromosome maintenance proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR20939SORTING NEXIN 20, 21Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR14002ENDOGLIN/TGF-BETA RECEPTOR TYPE IIIInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11630DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015031Biological Processprotein transportInterproscan
GO:0031901Cellular Componentearly endosome membraneInterproscan
GO:1901981Molecular Functionphosphatidylinositol phosphate bindingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0017116Molecular Functionsingle-stranded DNA helicase activityInterproscan
GO:0042555Cellular ComponentMCM complexInterproscan

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