Detailed information of Aala_g29.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3031946.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q05118Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00698Acyl_transf_1Acyl transferase domainDomainInterproscan
PF02801Ketoacyl-synt_CBeta-ketoacyl synthase, C-terminal domainDomainInterproscan
PF16197KAsynt_C_assocKetoacyl-synthetase C-terminal extensionFamilyInterproscan
PF00109ketoacyl-syntBeta-ketoacyl synthase, N-terminal domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF06101Vps62Vacuolar protein sorting-associated protein 62FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR006580DomainZinc finger, TTF-typeInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR018201Active_siteBeta-ketoacyl synthase, active siteInterproscan
IPR014043DomainAcyl transferaseInterproscan
IPR016036Homologous_superfamilyMalonyl-CoA ACP transacylase, ACP-bindingInterproscan
IPR016039Homologous_superfamilyThiolase-likeInterproscan
IPR014031DomainBeta-ketoacyl synthase, C-terminalInterproscan
IPR032821DomainPolyketide synthase, C-terminal extensionInterproscan
IPR001227Homologous_superfamilyAcyl transferase domain superfamilyInterproscan
IPR050091FamilyPolyketide and Nonribosomal Peptide Biosynthesis EnzymesInterproscan
IPR020841DomainPolyketide synthase, beta-ketoacyl synthase domainInterproscan
IPR014030DomainBeta-ketoacyl synthase, N-terminalInterproscan
IPR016035Homologous_superfamilyAcyl transferase/acyl hydrolase/lysophospholipaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR052229FamilyCollagen VI and Biomineralization Protein PIFInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR009291FamilyVacuolar protein sorting-associated protein 62Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR45749-Interproscan
PTHR43775FATTY ACID SYNTHASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR22588UNCHARACTERIZEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR48174DUF946 FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004315Molecular Function3-oxoacyl-[acyl-carrier-protein] synthase activityInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0004312Molecular Functionfatty acid synthase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11275H1_5; histone H1/5-Chromosome and associated proteinsko03036deepkoala

TOP