Detailed information of Aala_g290.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF4094154.1, unnamed protein product [Rotaria magnacalcarata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16423Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8CGK3Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2
Q924S5Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04991LicDLicD familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF08797HIRANHIRAN domainDomainInterproscan
PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007074FamilyLicD familyInterproscan
IPR052613FamilyLicD transferaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR052970FamilyInner ear hair cell lipoxygenase homology domain-containing proteinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR014905DomainHIRAN domainInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR003111DomainLon protease, N-terminal domainInterproscan
IPR027065FamilyLon proteaseInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13627FUKUTIN RELATED PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45901PROTEIN CBG12474Interproscan
PTHR43718LON PROTEASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR47679PROTEIN TORNADO 1Interproscan
PTHR44170PROTEIN SIDEKICKInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0006515Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0030163Biological Processprotein catabolic processInterproscan
GO:0051131Biological Processchaperone-mediated protein complex assemblyInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07937ARF1_2; ADP-ribosylation factor 1/2-Viral proteinsko03200deepkoala
GTP-binding proteinsko04031deepkoala

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