Gene detail

Detailed information of Aala_g299.t1 in Alatina alata

Genomic Location: :...
NR annotation: KXJ22207.1, hypothetical protein AC249_AIPGENE22150 [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8WXW3	Progesterone-induced-blocking factor 1 OS=Homo sapiens OX=9606 GN=PIBF1 PE=1 SV=2
Q5XGY1	Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis OX=8355 GN=tsr1 PE=2 SV=1
Q5SWD9	Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13812	PPR_3	Pentatricopeptide repeat domain	Repeat	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026205	Family	Progesterone-induced-blocking factor 1	Interproscan
IPR002885	Repeat	Pentatricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR033490	Family	Leucine-rich PPR motif-containing protein	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR039761	Family	Ribosome biogenesis protein Bms1/Tsr1	Interproscan
IPR014010	Domain	REJ domain	Interproscan
IPR051372	Family	Pre-mRNA-splicing factor CWC21	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18950	PROGESTERONE-INDUCED BLOCKING FACTOR 1	Interproscan
PTHR46669	LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL	Interproscan
PTHR48209	AGL056WP	Interproscan
PTHR12858	RIBOSOME BIOGENESIS PROTEIN	Interproscan
PTHR36562	SERINE/ARGININE REPETITIVE MATRIX 2	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19303	TRANSPOSON	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0034451	Cellular Component	centriolar satellite	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003730	Molecular Function	mRNA 3'-UTR binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0070129	Biological Process	regulation of mitochondrial translation	Interproscan
GO:0000462	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0000479	Biological Process	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0030688	Cellular Component	preribosome, small subunit precursor	Interproscan
GO:0034511	Molecular Function	U3 snoRNA binding	Interproscan
GO:0042254	Biological Process	ribosome biogenesis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14565	NOP58; nucleolar protein 58	-	Ribosome biogenesis	ko03009	deepkoala