Detailed information of Aala_g301.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1696946.1, Transposable element Tcb2 transposase [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62773Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus OX=10116 GN=Slc28a2 PE=1 SV=1
O88627Sodium/nucleoside cotransporter 2 OS=Mus musculus OX=10090 GN=Slc28a2 PE=1 SV=2
O43868Sodium/nucleoside cotransporter 2 OS=Homo sapiens OX=9606 GN=SLC28A2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF11945WASH_WAHDWAHD domain of WASH complexDomainInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07662Nucleos_tra2_CNa+ dependent nucleoside transporter C-terminusFamilyInterproscan
PF07670GateNucleoside recognitionDomainInterproscan
PF17772zf-MYSTMYST family zinc finger domainDomainInterproscan
PF16123HAGH_CHydroxyacylglutathione hydrolase C-terminusFamilyInterproscan
PF00753Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR028290FamilyWASH1Interproscan
IPR021854DomainWASH1, WAHD domainInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR008276FamilyConcentrative nucleoside transporterInterproscan
IPR011657DomainConcentrative nucleoside transporter C-terminal domainInterproscan
IPR011642DomainNucleoside transporter/FeoB GTPase, Gate domainInterproscan
IPR040706DomainMYST, zinc finger domainInterproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR032282DomainHydroxyacylglutathione hydrolase, C-terminal domainInterproscan
IPR017782FamilyHydroxyacylglutathione hydrolaseInterproscan
IPR035680DomainHydroxyacylglutathione hydrolase, MBL domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR23331CXYORF1Interproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR10590SODIUM/NUCLEOSIDE COTRANSPORTERInterproscan
PTHR35846PROTEIN CBG05131Interproscan
PTHR11935BETA LACTAMASE DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0034314Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0043014Molecular Functionalpha-tubulin bindingInterproscan
GO:0043015Molecular Functiongamma-tubulin bindingInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan
GO:0071203Cellular ComponentWASH complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005337Molecular Functionnucleoside transmembrane transporter activityInterproscan
GO:0005415Molecular Functionnucleoside:sodium symporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015293Molecular Functionsymporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:1901642Biological Processnucleoside transmembrane transportInterproscan
GO:0004416Molecular Functionhydroxyacylglutathione hydrolase activityInterproscan
GO:0019243Biological Processmethylglyoxal catabolic process to D-lactate via S-lactoyl-glutathioneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01069gloB, gloC, HAGH; hydroxyacylglutathione hydrolaseEC:3.1.2.6
Pyruvate metabolismko00620deepkoala

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