Gene detail

Detailed information of Aala_g303.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015751200.1, PREDICTED: protein bicaudal D homolog 2-like [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96G01	Protein bicaudal D homolog 1 OS=Homo sapiens OX=9606 GN=BICD1 PE=1 SV=3
Q3MII6	TBC1 domain family member 25 OS=Homo sapiens OX=9606 GN=TBC1D25 PE=1 SV=2
A1A5B6	TBC1 domain family member 25 OS=Mus musculus OX=10090 GN=Tbc1d25 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF15113	TMEM117	TMEM117 protein family	Family	Interproscan
PF09730	BicD	Microtubule-associated protein Bicaudal-D	Coiled-coil	Interproscan
PF00566	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR029370	Family	TMEM117 protein	Interproscan
IPR014010	Domain	REJ domain	Interproscan
IPR018477	Family	Bicaudal-D protein	Interproscan
IPR000195	Domain	Rab-GAP-TBC domain	Interproscan
IPR035969	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR31226	TRANSMEMBRANE PROTEIN 117	Interproscan
PTHR31233	BICAUDAL D FAMILY MEMBER	Interproscan
PTHR22957	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0070059	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:0008093	Molecular Function	cytoskeletal anchor activity	Interproscan
GO:0070840	Molecular Function	dynein complex binding	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24799	TBC1D25; TBC1 domain family member 25	-	Membrane trafficking	ko04131	deepkoala