Detailed information of Aala_g308.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI6651215.1, hypothetical protein LOD99_5362 [Oopsacas minuta]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
Q5U2Y6Tuftelin-interacting protein 11 OS=Rattus norvegicus OX=10116 GN=Tfip11 PE=1 SV=1
Q9ERA6Tuftelin-interacting protein 11 OS=Mus musculus OX=10090 GN=Tfip11 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF00375SDFSodium:dicarboxylate symporter familyFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050745FamilyMultifunctional regulatory proteinsInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR037830FamilyZZ-type zinc finger-containing protein 3Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001991FamilySodium:dicarboxylate symporterInterproscan
IPR036458Homologous_superfamilySodium:dicarboxylate symporter superfamilyInterproscan
IPR018107Conserved_siteSodium:dicarboxylate symporter, conserved siteInterproscan
IPR050746FamilyDicarboxylate/Amino Acid:Cation SymporterInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24189MYOTROPHINInterproscan
PTHR22705ZINC FINGER, ZZ DOMAIN CONTAINING 3Interproscan
PTHR11958SODIUM/DICARBOXYLATE SYMPORTER-RELATEDInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015293Molecular Functionsymporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005313Molecular FunctionL-glutamate transmembrane transporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015175Molecular Functionneutral L-amino acid transmembrane transporter activityInterproscan
GO:0015501Molecular Functionglutamate:sodium symporter activityInterproscan
GO:0015813Biological ProcessL-glutamate transmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11072potA; spermidine/putrescine transport system ATP-binding proteinEC:7.6.2.11
Chromosome and associated proteinsko03036deepkoala
Viral proteinsko03200deepkoala
Transportersko02000deepkoala

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