Gene detail

Detailed information of Aala_g314.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCG8429548.1, endonuclease/exonuclease/phosphatase family protein [Candidatus Omnitrophota bacterium]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O02751	Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8	Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF13936	HTH_38	Helix-turn-helix domain	Domain	Interproscan
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR052343	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR052338	Family	Transposase_5	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR047655	Family	Transposase IS630-like	Interproscan
IPR025246	Domain	Transposase IS30-like HTH domain	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46890	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan
PTHR23022	TRANSPOSABLE ELEMENT-RELATED	Interproscan
PTHR36912	ANTIGEN 332, DBL-LIKE PROTEIN-RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan