Gene detail

Detailed information of Aala_g316.t1 in Alatina alata

Genomic Location: :...
NR annotation: HCX22453.1, hypothetical protein [Cytophagales bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q09575	Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13472	Lipase_GDSL_2	GDSL-like Lipase/Acylhydrolase family	Domain	Interproscan
PF01480	PWI	PWI domain	Family	Interproscan
PF14413	Thg1C	Thg1 C terminal domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR013830	Domain	SGNH hydrolase-type esterase domain	Interproscan
IPR036514	Homologous_superfamily	SGNH hydrolase superfamily	Interproscan
IPR002483	Domain	PWI domain	Interproscan
IPR036483	Homologous_superfamily	PWI domain superfamily	Interproscan
IPR052225	Family	Serine/arginine repetitive matrix	Interproscan
IPR038469	Homologous_superfamily	tRNAHis guanylyltransferase Thg1 superfamily	Interproscan
IPR025845	Domain	Thg1 C-terminal domain	Interproscan
IPR051860	Family	Plasmodium Circumsporozoite Invasion Protein	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR23148	SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN	Interproscan
PTHR44826	SPORE COAT PROTEIN SP85	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0048024	Biological Process	regulation of mRNA splicing, via spliceosome	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14093	ehaB; energy-converting hydrogenase A subunit B	-	Energy metabolism	-	deepkoala