Detailed information of Aala_g319.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI5106486.1, hypothetical protein C0J45_4183, partial [Silurus meridionalis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11533Dystrophin OS=Gallus gallus OX=9031 GN=DMD PE=2 SV=1
O08810116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1
A4FUD3116 kDa U5 small nuclear ribonucleoprotein component OS=Bos taurus OX=9913 GN=EFTUD2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00225KinesinKinesin motor domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00077RVPRetroviral aspartyl proteaseDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR027640FamilyKinesin-like proteinInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR034132DomainRetropepsin Saci-like domainInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR018061DomainRetropepsinsInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47968CENTROMERE PROTEIN EInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR33064POL PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR42908TRANSLATION ELONGATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030623Molecular FunctionU5 snRNA bindingInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02652pilB; type IV pilus assembly protein PilB-Bacterial motility proteinsko02035deepkoala

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