Detailed information of Aala_g321.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH2322247.1, Hypothetical predicted protein [Pelobates cultripes]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BYJ6TBC1 domain family member 4 OS=Mus musculus OX=10090 GN=Tbc1d4 PE=1 SV=2
Q86TI0TBC1 domain family member 1 OS=Homo sapiens OX=9606 GN=TBC1D1 PE=1 SV=2
Q60949TBC1 domain family member 1 OS=Mus musculus OX=10090 GN=Tbc1d1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02137A_deaminAdenosine-deaminase (editase) domainFamilyInterproscan
PF00071RasRas familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF15901Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002466DomainAdenosine deaminase/editaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002041FamilyRan GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR050302FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR031777DomainSortilin, C-terminalInterproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan
IPR031778DomainSortilin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINInterproscan
PTHR24071RAN GTPASEInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47219RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR12106SORTILIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003726Molecular Functiondouble-stranded RNA adenosine deaminase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006382Biological Processadenosine to inosine editingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008251Molecular FunctiontRNA-specific adenosine deaminase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004000Molecular Functionadenosine deaminase activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0000054Biological Processribosomal subunit export from nucleusInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07936RAN; GTP-binding nuclear protein Ran-GTP-binding proteinsko04031deepkoala

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