Detailed information of Aala_g337.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP3891066.1, DDE-type integrase/transposase/recombinase [Desulfobulbaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6JWV8Popeye domain-containing 2 OS=Danio rerio OX=7955 GN=popdc2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035309FamilyProteasome activator complex subunit 4Interproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR006916FamilyPopeye proteinInterproscan
IPR004244FamilyTransposase, L1Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32170PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12101POPEYE DOMAIN CONTAINING PROTEINInterproscan
PTHR11505L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0010499Biological Processproteasomal ubiquitin-independent protein catabolic processInterproscan
GO:0016504Molecular Functionpeptidase activator activityInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0007507Biological Processheart developmentInterproscan
GO:0007519Biological Processskeletal muscle tissue developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030552Molecular FunctioncAMP bindingInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0051146Biological Processstriated muscle cell differentiationInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197Biological ProcessretrotranspositionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

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