Detailed information of Aala_g346.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0221995.1, hypothetical protein LSAT2_026737 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q10126Putative uncharacterized transposon-derived protein F52C9.6 OS=Caenorhabditis elegans OX=6239 GN=F52C9.6 PE=5 SV=1
Q14565Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens OX=9606 GN=DMC1 PE=1 SV=2
Q61880Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus OX=10090 GN=Dmc1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08423Rad51Rad51DomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR040155FamilyCEBPZ/Mak21-likeInterproscan
IPR011004Homologous_superfamilyTrimeric LpxA-like superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR020588DomainDNA recombination and repair protein RecA-like, ATP-binding domainInterproscan
IPR013632DomainDNA recombination and repair protein Rad51-like, C-terminalInterproscan
IPR020587DomainDNA recombination and repair protein RecA, monomer-monomer interfaceInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR039808FamilyCadherinInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR033333FamilyFanconi anemia group B proteinInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12048CCAAT-BINDING FACTOR-RELATEDInterproscan
PTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERInterproscan
PTHR24027CADHERIN-23Interproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR28450FANCONI ANEMIA GROUP B PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0000150Molecular FunctionDNA strand exchange activityInterproscan
GO:0000730Biological ProcessDNA recombinase assemblyInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0042148Biological ProcessDNA strand invasionInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0043240Cellular ComponentFanconi anaemia nuclear complexInterproscan
GO:1905168Biological Processpositive regulation of double-strand break repair via homologous recombinationInterproscan
GO:1990414Biological Processreplication-born double-strand break repair via sister chromatid exchangeInterproscan
GO:2000042Biological Processnegative regulation of double-strand break repair via homologous recombinationInterproscan

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