Detailed information of Aala_g351.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_014790425.1, uncharacterized protein LOC106883802 isoform X2 [Octopus bimaculoides]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VHK6Iron-sulfur cluster assembly enzyme IscU OS=Drosophila melanogaster OX=7227 GN=IscU PE=1 SV=1
Q03020Iron sulfur cluster assembly protein 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ISU1 PE=1 SV=1
Q9H1K1Iron-sulfur cluster assembly enzyme ISCU OS=Homo sapiens OX=9606 GN=ISCU PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01592NifU_NNifU-like N terminal domainFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05345He_PIGPutative Ig domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050149FamilyCollagen superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR002871DomainNIF system FeS cluster assembly, NifU, N-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR030398DomainDG-type SEA domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR034132DomainRetropepsin Saci-like domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10093IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOGInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR21559DYSTROGLYCAN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0006879Biological Processintracellular iron ion homeostasisInterproscan
GO:0008198Molecular Functionferrous iron bindingInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0002009Biological Processmorphogenesis of an epitheliumInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0016011Cellular Componentdystroglycan complexInterproscan
GO:0016203Biological Processmuscle attachmentInterproscan
GO:0021675Biological Processnerve developmentInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

TOP