Genomic Location: :...
NR annotation: XP_047235178.1, neural cell adhesion molecule 1a isoform X20 [Girardinichthys multiradiatus]
| CDS |
| Transcript |
| Protein |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF17791 | MG3 | Macroglobulin domain MG3 | Domain | Interproscan |
| PF17789 | MG4 | Macroglobulin domain MG4 | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF04991 | LicD | LicD family | Domain | Interproscan |
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF13843 | DDE_Tnp_1_7 | Transposase IS4 | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR050473 | Family | Alpha-2-macroglobulin/Complement system | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR041555 | Domain | Macroglobulin domain MG3 | Interproscan |
| IPR040839 | Domain | Macroglobulin domain MG4 | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR050951 | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR005819 | Family | Linker histone H1/H5 | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR052613 | Family | LicD transferase | Interproscan |
| IPR007074 | Family | LicD family | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR029526 | Domain | PiggyBac transposable element-derived protein | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR051170 | Family | Neural and epithelial cell adhesion domain-containing protein | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR47027 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR11412 | MACROGLOBULIN / COMPLEMENT | Interproscan |
| PTHR37984 | PROTEIN CBG26694 | Interproscan |
| PTHR13627 | FUKUTIN RELATED PROTEIN | Interproscan |
| PTHR46599 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 | Interproscan |
| PTHR12231 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000786 | Cellular Component | nucleosome | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006334 | Biological Process | nucleosome assembly | Interproscan |
| GO:0030527 | Molecular Function | structural constituent of chromatin | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
