Detailed information of Aala_g368.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1653069.1, Peroxisome biogenesis factor 1 [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9GPR3TM2 domain-containing protein DDB_G0277895 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277895 PE=3 SV=1
A7MIK3Chaperone protein DnaJ OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=dnaJ PE=3 SV=1
A4W6D6Chaperone protein DnaJ OS=Enterobacter sp. (strain 638) OX=399742 GN=dnaJ PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF18296MID_MedPIWIMID domain of medPIWIDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00226DnaJDnaJ domainDomainInterproscan
PF05154TM2TM2 domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03121Herpes_UL52Herpesviridae UL52/UL70 DNA primaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR051139FamilyMediator complex subunit 13Interproscan
IPR041285DomainMID domain of medPIWIInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR007829DomainTM2 domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR044917FamilyDNA-directed primase/polymerase proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR33776ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR48249MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45749-Interproscan
PTHR44733DNAJ HOMOLOG SUBFAMILY C MEMBER 22Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR31399DNA-DIRECTED PRIMASE / POLYMERASE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0003896Molecular FunctionDNA primase activityInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0006264Biological Processmitochondrial DNA replicationInterproscan
GO:0009411Biological Processresponse to UVInterproscan
GO:0019985Biological Processtranslesion synthesisInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0042276Biological Processerror-prone translesion synthesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22761PRIMPOL; DNA-directed primase/polymerase proteinEC:2.7.7.102
EC:2.7.7.7
Chaperones and folding catalystsko03110deepkoala
Bacterial motility proteinsko02035deepkoala
Mitochondrial biogenesisko03029deepkoala

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