Detailed information of Aala_g38.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP3667059.1, DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P21571ATP synthase peripheral stalk subunit F6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pf PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05511ATP-synt_F6Mitochondrial ATP synthase coupling factor 6FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050972FamilySerine-aspartate repeat-containing proteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR008387FamilyATP synthase-coupling factor 6, mitochondrialInterproscan
IPR036204Homologous_superfamilyATP synthase-coupling factor 6 superfamily, mitochondrialInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR005533DomainAMOP domainInterproscan
IPR051495FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan
IPR003886DomainNIDO domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34403TOL-PAL SYSTEM PROTEIN TOLAInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR12441ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIALInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13802MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000276Cellular Componentobsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)Interproscan
GO:0005753Cellular Componentobsolete mitochondrial proton-transporting ATP synthase complexInterproscan
GO:0015078Molecular Functionproton transmembrane transporter activityInterproscan
GO:0015986Biological Processproton motive force-driven ATP synthesisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan

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