Gene detail

Detailed information of Aala_g381.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCG8624218.1, hypothetical protein [Pseudomonadota bacterium]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P08548	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00077	RVP	Retroviral aspartyl protease	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR040014	Family	Corepressor interacting with RBPJ 1	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR018061	Domain	Retropepsins	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR035717	Domain	Drebrin-like protein, SH3 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13151	CBF1 INTERACTING COREPRESSOR CIR	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR10829	CORTACTIN AND DREBRIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005884	Cellular Component	actin filament	Interproscan
GO:0014069	Cellular Component	postsynaptic density	Interproscan
GO:0030027	Cellular Component	lamellipodium	Interproscan
GO:0030425	Cellular Component	dendrite	Interproscan
GO:0030427	Cellular Component	site of polarized growth	Interproscan
GO:0030833	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0030864	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0045211	Cellular Component	postsynaptic membrane	Interproscan
GO:0045773	Biological Process	positive regulation of axon extension	Interproscan
GO:0048812	Biological Process	neuron projection morphogenesis	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0061003	Biological Process	positive regulation of dendritic spine morphogenesis	Interproscan
GO:0098974	Biological Process	postsynaptic actin cytoskeleton organization	Interproscan