Gene detail

Detailed information of Aala_g382.t1 in Alatina alata

Genomic Location: :...
NR annotation: BAQ19163.1, mothers against decapentaplegic 1/5/8a, partial [Cladonema pacificum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q56I99	Mothers against decapentaplegic homolog 5 OS=Gallus gallus OX=9031 GN=SMAD5 PE=1 SV=1
Q9W7E7	Mothers against decapentaplegic homolog 5 OS=Danio rerio OX=7955 GN=smad5 PE=2 SV=1
Q1JQA2	Mothers against decapentaplegic homolog 1 OS=Bos taurus OX=9913 GN=SMAD1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03166	MH2	MH2 domain	Family	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF13245	AAA_19	AAA domain	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013790	Family	Dwarfin	Interproscan
IPR001132	Domain	SMAD domain, Dwarfin-type	Interproscan
IPR017855	Homologous_superfamily	SMAD-like domain superfamily	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051055	Family	PIF1 DNA helicase	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13703	SMAD	Interproscan
PTHR47642	ATP-DEPENDENT DNA HELICASE	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR47272	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0007179	Biological Process	transforming growth factor beta receptor signaling pathway	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030509	Biological Process	BMP signaling pathway	Interproscan
GO:0060395	Biological Process	SMAD protein signal transduction	Interproscan
GO:0070411	Molecular Function	I-SMAD binding	Interproscan
GO:0071144	Cellular Component	heteromeric SMAD protein complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02183	CALM; calmodulin	-	Exosome	ko04147	deepkoala