Detailed information of Aala_g387.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044179329.1, uncharacterized protein LOC122960860 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5AI15Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PAB1 PE=3 SV=1
A5DM21Polyadenylate-binding protein, cytoplasmic and nuclear OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PAB1 PE=3 SV=2
A3LXL0Polyadenylate-binding protein, cytoplasmic and nuclear OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=PAB1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF03517VoldacsRegulator of volume decrease after cellular swellingDomainInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR014010DomainREJ domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR039924FamilyProtein ICln/Lot5/Saf5Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11176BOULE-RELATEDInterproscan
PTHR21399CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLNInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008494Molecular Functiontranslation activator activityInterproscan
GO:0045948Biological Processpositive regulation of translational initiationInterproscan
GO:0070935Biological Process3'-UTR-mediated mRNA stabilizationInterproscan
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0034715Cellular ComponentpICln-Sm protein complexInterproscan
GO:0045292Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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