Detailed information of Aala_g390.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047136757.1, histone deacetylase 5 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NZM9Histone deacetylase 4 OS=Mus musculus OX=10090 GN=Hdac4 PE=1 SV=1
Q99P99Histone deacetylase 4 OS=Rattus norvegicus OX=10116 GN=Hdac4 PE=1 SV=2
P83038Histone deacetylase 4 OS=Gallus gallus OX=9031 GN=HDAC4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00805PentapeptidePentapeptide repeats (8 copies)RepeatInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001958FamilyTetracycline resistance protein TetA/multidrug resistance protein MdtG-likeInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR051068FamilyMajor Facilitator Superfamily Domain-Containing ProteinInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR001646RepeatPentapeptide repeatInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR051223FamilyPolycystinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23510INNER MEMBRANE TRANSPORT PROTEIN YAJRInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22954RETROVIRAL PROTEASE-RELATEDInterproscan
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

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