Detailed information of Aala_g393.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028418814.1, LOW QUALITY PROTEIN: tigger transposable element-derived protein 4-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5LJZ2Histone-lysine N-methyltransferase SETD1 OS=Drosophila melanogaster OX=7227 GN=Set1 PE=1 SV=1
Q1LY77Histone-lysine N-methyltransferase SETD1B-A OS=Danio rerio OX=7955 GN=setd1ba PE=1 SV=2
Q9UPS6Histone-lysine N-methyltransferase SETD1B OS=Homo sapiens OX=9606 GN=SETD1B PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR044570FamilyHistone-lysine N-methyltransferase Set1-likeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47481-Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan
PTHR45814HISTONE-LYSINE N-METHYLTRANSFERASE SETD1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0048188Cellular ComponentSet1C/COMPASS complexInterproscan
GO:0051568Biological Processobsolete histone H3-K4 methylationInterproscan

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