Detailed information of Aala_g394.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_010205640.1, PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial [Colius striatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q07864DNA polymerase epsilon catalytic subunit A OS=Homo sapiens OX=9606 GN=POLE PE=1 SV=5
Q9WVF7DNA polymerase epsilon catalytic subunit A OS=Mus musculus OX=10090 GN=Pole PE=1 SV=3
Q9VCN1DNA polymerase epsilon catalytic subunit 1 OS=Drosophila melanogaster OX=7227 GN=PolE1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04752ChaCChaC-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029703FamilyDNA polymerase epsilon catalytic subunitInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR002153FamilyTransient receptor potential channel, canonicalInterproscan
IPR036568Homologous_superfamilyGamma-glutamyl cyclotransferase-like superfamilyInterproscan
IPR006840FamilyGlutathione-specific gamma-glutamylcyclotransferaseInterproscan
IPR013024DomainGamma-glutamyl cyclotransferase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT AInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan
PTHR12192CATION TRANSPORT PROTEIN CHAC-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006272Biological Processleading strand elongationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008310Molecular Functionsingle-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0008622Cellular Componentepsilon DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015279Molecular Functionstore-operated calcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034703Cellular Componentcation channel complexInterproscan
GO:0051480Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan
GO:0006751Biological Processglutathione catabolic processInterproscan
GO:0061928Molecular Functionglutathione specific gamma-glutamylcyclotransferase activityInterproscan
GO:0003839Molecular Functiongamma-glutamylcyclotransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07232CHAC, chaC; glutathione-specific gamma-glutamylcyclotransferaseEC:4.3.2.7
Glutathione metabolismko00480deepkoala

TOP