Gene detail

Detailed information of Aala_g396.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4021577.1, GPI mannosyltransferase 1 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5EA10	GPI alpha-1,4-mannosyltransferase I, catalytic subunit OS=Bos taurus OX=9913 GN=PIGM PE=2 SV=1
Q4R4E1	GPI alpha-1,4-mannosyltransferase I, catalytic subunit OS=Macaca fascicularis OX=9541 GN=PIGM PE=2 SV=1
Q8C2R7	GPI alpha-1,4-mannosyltransferase I, catalytic subunit OS=Mus musculus OX=10090 GN=Pigm PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF05007	Mannosyl_trans	Mannosyltransferase (PIG-M)	Family	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF10587	EF-1_beta_acid	Eukaryotic elongation factor 1 beta central acidic region	Domain	Interproscan
PF00736	EF1_GNE	EF-1 guanine nucleotide exchange domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR052958	Family	Interferon-induced PKR regulator	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR007704	Family	GPI mannosyltransferase 1	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036219	Homologous_superfamily	Translation elongation factor eEF-1beta-like superfamily	Interproscan
IPR018940	Domain	Elongation factor 1 beta central acidic region, eukaryote	Interproscan
IPR014038	Domain	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	Interproscan
IPR014717	Homologous_superfamily	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Interproscan
IPR001326	Conserved_site	Translation elongation factor EF1B, beta/delta chains, conserved site	Interproscan
IPR049720	Family	Translation elongation factor EF1B, beta/delta subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR46704	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR46289	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47972	KINESIN-LIKE PROTEIN KLP-3	Interproscan
PTHR12886	PIG-M MANNOSYLTRANSFERASE	Interproscan
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11595	EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0004376	Molecular Function	glycolipid mannosyltransferase activity	Interproscan
GO:0006506	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0051751	Molecular Function	alpha-1,4-mannosyltransferase activity	Interproscan
GO:0000030	Molecular Function	mannosyltransferase activity	Interproscan
GO:1990529	Cellular Component	glycosylphosphatidylinositol-mannosyltransferase I complex	Interproscan
GO:0007508	Biological Process	larval heart development	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0061343	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005853	Cellular Component	eukaryotic translation elongation factor 1 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21812	E5; Alphapapillomavirus protein E5	-	Glycosyltransferases	ko01003	deepkoala
			Translation factors	ko03012	deepkoala
			Viral proteins	ko03200	deepkoala