Gene detail

Detailed information of Aala_g399.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAD7412218.1, unnamed protein product, partial [Timema cristinae]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
E9Q236	ATP-binding cassette sub-family C member 4 OS=Mus musculus OX=10090 GN=Abcc4 PE=1 SV=1
F1M3J4	ATP-binding cassette subfamily C member 4 OS=Rattus norvegicus OX=10116 GN=Abcc4 PE=1 SV=3
O15439	ATP-binding cassette sub-family C member 4 OS=Homo sapiens OX=9606 GN=ABCC4 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF12807	eIF3_p135	Translation initiation factor eIF3 subunit 135	Family	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR051254	Family	Protein Phosphatase 1 Regulatory Subunit 15	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR027523	Family	CLU domain containing protein	Interproscan
IPR033646	Domain	CLU central domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR050173	Family	ATP-binding cassette transporter C	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR037493	Family	Exodeoxyribonuclease III-like	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR16489	GH11727P	Interproscan
PTHR12601	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	Interproscan
PTHR43250	EXODEOXYRIBONUCLEASE III	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0019888	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0032516	Biological Process	obsolete positive regulation of phosphoprotein phosphatase activity	Interproscan
GO:0034976	Biological Process	response to endoplasmic reticulum stress	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006996	Biological Process	organelle organization	Interproscan
GO:0048312	Biological Process	intracellular distribution of mitochondria	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0008311	Molecular Function	double-stranded DNA 3'-5' DNA exonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan