Gene detail

Detailed information of Aala_g407.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044183535.1, uncharacterized protein LOC122964110 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q03278	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q9ZT94	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052343	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR050384	Family	Endophilin/SH3RF	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR46890	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan
PTHR14167	SH3 DOMAIN-CONTAINING	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0032436	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0046330	Biological Process	positive regulation of JNK cascade	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18416	THEX1, ERI1; 3'-5' exoribonuclease 1	EC:3.1.-.-	Chromosome and associated proteins	ko03036	deepkoala