Detailed information of Aala_g415.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_051787213.1, uncharacterized protein LOC127529013, partial [Erpetoichthys calabaricus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2QI47Usherin OS=Mus musculus OX=10090 GN=Ush2A PE=1 SV=2
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF18198AAA_lid_11Dynein heavy chain AAA lid domainDomainInterproscan
PF03028Dynein_heavyDynein heavy chain region D6 P-loop domain DomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan
IPR041658DomainDynein heavy chain AAA lid domainInterproscan
IPR004273DomainDynein heavy chain region D6 P-loop domainInterproscan
IPR042219Homologous_superfamilyDynein heavy chain AAA lid domain superfamilyInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050713FamilyReceptor-type Tyrosine-protein Phosphatases/UshersInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47679PROTEIN TORNADO 1Interproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR46957CYTOKINE RECEPTORInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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