Detailed information of Aala_g426.t1 in Alatina alata

Genomic Location: :...
NR annotation: HAO15372.1, hypothetical protein [Tenacibaculum sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q09575Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
P27502Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14857TMEM151TMEM151 familyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003111DomainLon protease, N-terminal domainInterproscan
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR039808FamilyCadherinInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR051055FamilyPIF1 DNA helicaseInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR026767FamilyTransmembrane protein 151Interproscan
IPR000742DomainEGF-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050717FamilyC2H2-type Zinc-Finger Transcription RegulatorsInterproscan
IPR036716Homologous_superfamilyPesticidal crystal protein, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23327RING FINGER PROTEIN 127Interproscan
PTHR24027CADHERIN-23Interproscan
PTHR47642ATP-DEPENDENT DNA HELICASEInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR31893TRANSMEMBRANE PROTEIN 151 HOMOLOGInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR14196ODD-SKIPPED - RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33223CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007043Biological Processcell-cell junction assemblyInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016339Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0034332Biological Processadherens junction organizationInterproscan
GO:0044331Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001655Biological Processurogenital system developmentInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009790Biological Processembryo developmentInterproscan
GO:0090729Molecular Functiontoxin activityInterproscan

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