Gene detail

Detailed information of Aala_g43.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_053400465.1, uncharacterized protein LOC123545673 isoform X1 [Mercenaria mercenaria]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9HCU4	Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens OX=9606 GN=CELSR2 PE=1 SV=1
O88278	Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus OX=10116 GN=Celsr3 PE=1 SV=1
Q91ZI0	Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus OX=10090 GN=Celsr3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF21292	EME1-MUS81_C	EME1/MUS81, C-terminal	Domain	Interproscan
PF00028	Cadherin	Cadherin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR042530	Homologous_superfamily	EME1/EME2, C-terminal domain	Interproscan
IPR033309	Family	Crossover junction endonuclease Mus81	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR039808	Family	Cadherin	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22954	RETROVIRAL PROTEASE-RELATED	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan
PTHR13451	CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81	Interproscan
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR24027	CADHERIN-23	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0000712	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000727	Biological Process	double-strand break repair via break-induced replication	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0006308	Biological Process	DNA catabolic process	Interproscan
GO:0008821	Molecular Function	crossover junction DNA endonuclease activity	Interproscan
GO:0031573	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0048257	Molecular Function	3'-flap endonuclease activity	Interproscan
GO:0048476	Cellular Component	Holliday junction resolvase complex	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016342	Cellular Component	catenin complex	Interproscan
GO:0045296	Molecular Function	cadherin binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0098742	Biological Process	cell-cell adhesion via plasma-membrane adhesion molecules	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan