Detailed information of Aala_g451.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3993666.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O23184Calcium-binding protein CML19 OS=Arabidopsis thaliana OX=3702 GN=CML19 PE=1 SV=1
Q11083Uncharacterized calcium-binding protein B0563.7 OS=Caenorhabditis elegans OX=6239 GN=B0563.7 PE=4 SV=1
Q5U4W6Integrator complex subunit 6-B OS=Xenopus laevis OX=8355 GN=ints6-b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13405EF-hand_6EF-hand domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF04045P34-ArcArp2/3 complex, 34 kD subunit p34-ArcFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052575FamilySmall subunit processome component 20Interproscan
IPR051113FamilyIntegrator complex subunit 6Interproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR043520FamilySpermatogenesis-associated protein 21Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR034666Homologous_superfamilyArp2/3 complex subunit 2/4Interproscan
IPR007188FamilyActin-related protein 2/3 complex subunit 2Interproscan
IPR051223FamilyPolycystinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17695UNCHARACTERIZEDInterproscan
PTHR12957DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATEDInterproscan
PTHR47500EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEINInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0032039Cellular Componentintegrator complexInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005885Cellular ComponentArp2/3 protein complexInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030041Biological Processactin filament polymerizationInterproscan
GO:0034314Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

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