Detailed information of Aala_g46.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015753462.1, PREDICTED: protein NLRC3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VFH6Protein Cep78 homolog OS=Drosophila melanogaster OX=7227 GN=CG7886 PE=2 SV=2
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q94HW2Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF00085ThioredoxinThioredoxinDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR052201FamilyLeucine-rich repeat-containing regulator of pluripotencyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR051223FamilyPolycystinInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR046791DomainPolycystin domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR052460FamilyEndoplasmic reticulum disulfide reductaseInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR017937Conserved_siteThioredoxin, conserved siteInterproscan
IPR013766DomainThioredoxin domainInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24111LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34Interproscan
PTHR47481-Interproscan
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan
PTHR44340DNAJ HOMOLOG SUBFAMILY C MEMBER 10Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005788Cellular Componentendoplasmic reticulum lumenInterproscan
GO:0015035Molecular Functionprotein-disulfide reductase activityInterproscan
GO:0016671Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptorInterproscan
GO:0036498Biological ProcessIRE1-mediated unfolded protein responseInterproscan
GO:0051787Molecular Functionmisfolded protein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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