Detailed information of Aala_g474.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP3901111.1, hypothetical protein [Desulfobacteraceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
H9D1R1Thioredoxin domain-containing protein 12 OS=Epinephelus coioides OX=94232 GN=Txndc12 PE=1 SV=1
Q5E936Thioredoxin domain-containing protein 12 OS=Bos taurus OX=9913 GN=TXNDC12 PE=2 SV=1
O95881Thioredoxin domain-containing protein 12 OS=Homo sapiens OX=9606 GN=TXNDC12 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19309Frem_NFrem protein N-terminal domainDomainInterproscan
PF16184Cadherin_3Cadherin-likeDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF11987IF-2Translation-initiation factor 2DomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF13899Thioredoxin_7Thioredoxin-likeDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039005RepeatCSPG repeatInterproscan
IPR045658DomainFRAS1-related extracellular matrix protein, N-terminal domainInterproscan
IPR051561FamilyFRAS1-related extracellular matrixInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036925Homologous_superfamilyTranslation initiation factor IF-2, domain 3 superfamilyInterproscan
IPR023115DomainTranslation initiation factor IF- 2, domain 3Interproscan
IPR015760FamilyTranslation initiation factor IF- 2Interproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR017379FamilyPDZ domain-containing protein GIPC1/2/3Interproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051099FamilyAnterior Gradient and Thioredoxin DomainInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR045221FamilySphingomyelin synthase-likeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR042815FamilyDynein regulatory complex protein 10Interproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45739MATRIX PROTEIN, PUTATIVE-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43381TRANSLATION INITIATION FACTOR IF-2-RELATEDInterproscan
PTHR12259RGS-GAIP INTERACTING PROTEIN GIPCInterproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR15337ANTERIOR GRADIENT PROTEIN-RELATEDInterproscan
PTHR21290SPHINGOMYELIN SYNTHETASEInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR31598IQ DOMAIN-CONTAINING PROTEIN DInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groupsInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0033188Molecular Functionsphingomyelin synthase activityInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan
GO:0047493Molecular Functionceramide cholinephosphotransferase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11600RRP41, EXOSC4, SKI6; exosome complex component RRP41-Messenger RNA biogenesisko03019deepkoala

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