Detailed information of Aala_g478.t1 in Alatina alata

Genomic Location: :...
NR annotation: RMX48058.1, hypothetical protein pdam_00002589, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B8JKP6GREB1-like protein OS=Danio rerio OX=7955 GN=greb1l PE=1 SV=2
Q9C091GREB1-like protein OS=Homo sapiens OX=9606 GN=GREB1L PE=1 SV=2
B9EJV3GREB1-like protein OS=Mus musculus OX=10090 GN=Greb1l PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20688GREB1_2ndGREB1, second domainDomainInterproscan
PF20692cpSF2-GREB1Circularly permuted SF2 helicase found in GREB1 proteinsDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR028422FamilyGREB1Interproscan
IPR048659DomainGREB1-like, second domainInterproscan
IPR048657DomainGREB1-like, circularly permuted SF2 helicase domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043449FamilyPHD finger protein 20-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46954C2H2-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR15720GREB1-RELATEDInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR15856PHD FINGER PROTEIN 20-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0044545Cellular ComponentNSL complexInterproscan

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