Detailed information of Aala_g479.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH2545814.1, hAT transposon family protein [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-BED

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02320UCR_hingeUbiquinol-cytochrome C reductase hinge proteinFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF00075RNase_HRNase HDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02892zf-BEDBED zinc fingerDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003422FamilyCytochrome b-c1 complex, subunit 6Interproscan
IPR036811Homologous_superfamilyUbiquinol-cytochrome C reductase hinge domain superfamilyInterproscan
IPR023184DomainUbiquinol-cytochrome C reductase hinge domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15336UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR35317OS04G0629600 PROTEINInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR34723PROTEIN CBG17025Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005750Cellular Componentobsolete mitochondrial respiratory chain complex IIIInterproscan
GO:0006122Biological Processmitochondrial electron transport, ubiquinol to cytochrome cInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00416QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6-Non-alcoholic fatty liver diseaseko04932deepkoala

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