Gene detail

Detailed information of Aala_g483.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_046864153.1, uncharacterized protein LOC124458095 isoform X2 [Xenia sp. Carnegie-2017]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96GM5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens OX=9606 GN=SMARCD1 PE=1 SV=2
Q61466	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus OX=10090 GN=Smarcd1 PE=1 SV=3
Q9VYG2	Brahma-associated protein of 60 kDa OS=Drosophila melanogaster OX=7227 GN=Bap60 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16065	DUF4807	Domain of unknown function (DUF4807)	Family	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033375	Family	CGG triplet repeat-binding protein 1	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR032072	Family	Protein of unknown function DUF4807	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32344	U1-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR36693	GH02722P	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13448	CML; calcium-binding protein CML	-	Plant-pathogen interaction	ko04626	deepkoala