Detailed information of Aala_g494.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP4777806.1, hypothetical protein [Planctomycetaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P0CV72Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1
A5PJJ7Short-chain dehydrogenase/reductase family 16C member 6 OS=Bos taurus OX=9913 GN=SDR16C6 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF21107STPRsSTPRs (score and three amino acid peptide repeats)RepeatInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan
PF14704DERMDermatopontinFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR048998DomainSTPR domainInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR011024Homologous_superfamilyGamma-crystallin-likeInterproscan
IPR026645FamilyDermatopontinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45749-Interproscan
PTHR24322PKSBInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

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