Gene detail

Detailed information of Aala_g497.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFR89107.1, craniofacial development protein 2-like [Elysia marginata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A4IFE9	Transmembrane 9 superfamily member 1 OS=Bos taurus OX=9913 GN=TM9SF1 PE=2 SV=1
O15321	Transmembrane 9 superfamily member 1 OS=Homo sapiens OX=9606 GN=TM9SF1 PE=1 SV=2
Q9DBU0	Transmembrane 9 superfamily member 1 OS=Mus musculus OX=10090 GN=Tm9sf1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF02990	EMP70	Endomembrane protein 70	Family	Interproscan
PF00383	dCMP_cyt_deam_1	Cytidine and deoxycytidylate deaminase zinc-binding region	Domain	Interproscan
PF14893	PNMA	PNMA	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR004240	Family	Nonaspanin (TM9SF)	Interproscan
IPR006262	Family	Cytidine deaminase, homotetrameric	Interproscan
IPR016192	Binding_site	APOBEC/CMP deaminase, zinc-binding	Interproscan
IPR050202	Family	Cytidine and Deoxycytidylate Deaminase	Interproscan
IPR002125	Domain	Cytidine and deoxycytidylate deaminase domain	Interproscan
IPR016193	Homologous_superfamily	Cytidine deaminase-like	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR048270	Domain	Paraneoplastic antigen Ma-like, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR10766	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	Interproscan
PTHR11644	CYTIDINE DEAMINASE	Interproscan
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0072657	Biological Process	protein localization to membrane	Interproscan
GO:0004126	Molecular Function	cytidine deaminase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0009972	Biological Process	cytidine deamination	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10808	RRM2; ribonucleoside-diphosphate reductase subunit M2	EC:1.17.4.1	Drug metabolism - other enzymes	ko00983	deepkoala
K10808	RRM2; ribonucleoside-diphosphate reductase subunit M2	EC:1.17.4.1	DNA repair and recombination proteins	ko03400	deepkoala