Gene detail

Detailed information of Aala_g499.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044164875.1, uncharacterized protein LOC114948843 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q06441	Thrombospondin-4 OS=Xenopus laevis OX=8355 GN=thbs4 PE=2 SV=1
Q9R0G6	Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P35445	Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF19433	NDNF_C	Neuron-derived Neurotrophic Factor C-terminal	Domain	Interproscan
PF00957	Synaptobrevin	Synaptobrevin	Family	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF02412	TSP_3	Thrombospondin type 3 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR019326	Family	Protein NDNF	Interproscan
IPR045805	Domain	Protein NDNF, C-terminal	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR001388	Family	Synaptobrevin-like	Interproscan
IPR042855	Domain	v-SNARE, coiled-coil homology domain	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR050938	Family	Collagen and Collagen-like Structural Proteins	Interproscan
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR003367	Repeat	Thrombospondin, type 3-like repeat	Interproscan
IPR028974	Homologous_superfamily	TSP type-3 repeat	Interproscan
IPR017897	Repeat	Thrombospondin, type 3 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR14619	NEURON-DERIVED NEUROTROPHIC FACTOR	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22954	RETROVIRAL PROTEASE-RELATED	Interproscan
PTHR37456	SI:CH211-266K2.1	Interproscan
PTHR10199	THROMBOSPONDIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18274	UMOD; uromodulin	-	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala