Detailed information of Aala_g535.t1 in Alatina alata

Genomic Location: :...
NR annotation: PIK51356.1, endonuclease-reverse transcriptase [Apostichopus japonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q05118Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
Q10126Putative uncharacterized transposon-derived protein F52C9.6 OS=Caenorhabditis elegans OX=6239 GN=F52C9.6 PE=5 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-BED
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02892zf-BEDBED zinc fingerDomainInterproscan
PF00955HCO3_cotranspHCO3- transporter familyFamilyInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR039687FamilyNephrocystin-1Interproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR011531DomainBicarbonate transporter-like, transmembrane domainInterproscan
IPR003020FamilyBicarbonate transporter, eukaryoticInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR024909FamilyCysteinyl-tRNA synthetase/mycothiol ligaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR15176NEPHROCYSTINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47981RAB FAMILYInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR40866DIMER_TNP_HAT DOMAIN-CONTAINING PROTEINInterproscan
PTHR11453ANION EXCHANGE PROTEINInterproscan
PTHR10890CYSTEINYL-TRNA SYNTHETASEInterproscan
PTHR24346MAP/MICROTUBULE AFFINITY-REGULATING KINASEInterproscan
PTHR22950AMINO ACID TRANSPORTERInterproscan
PTHR48209AGL056WPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0090251Biological Processprotein localization involved in establishment of planar polarityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0045335Cellular Componentphagocytic vesicleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006820Biological Processmonoatomic anion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005452Molecular Functionsolute:inorganic anion antiporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008510Molecular Functionsodium:bicarbonate symporter activityInterproscan
GO:0015701Biological Processbicarbonate transportInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0050801Biological Processmonoatomic ion homeostasisInterproscan
GO:0051453Biological Processregulation of intracellular pHInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004817Molecular Functioncysteine-tRNA ligase activityInterproscan
GO:0006423Biological Processcysteinyl-tRNA aminoacylationInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0015179Molecular FunctionL-amino acid transmembrane transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11792DDA1; DET1- and DDB1-associated protein 1-GTP-binding proteinsko04031deepkoala
Ubiquitin systemko04121deepkoala

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