Detailed information of Aala_g537.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI6650611.1, hypothetical protein LOD99_7661 [Oopsacas minuta]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UR07Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF13271DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF05028PARG_cat_CPoly (ADP-ribose) glycohydrolase (PARG), Macro domain foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR025139DomainDomain of unknown function DUF4062Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR007724FamilyPoly(ADP-ribose) glycohydrolaseInterproscan
IPR046372DomainPoly (ADP-ribose) glycohydrolase (PARG), catalytic domainInterproscan
IPR000358FamilyRibonucleotide reductase small subunit familyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47481-Interproscan
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR12837POLY ADP-RIBOSE GLYCOHYDROLASEInterproscan
PTHR23409RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004649Molecular Functionpoly(ADP-ribose) glycohydrolase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0006282Biological Processregulation of DNA repairInterproscan
GO:0009225Biological Processnucleotide-sugar metabolic processInterproscan
GO:1990966Biological ProcessATP generation from poly-ADP-D-riboseInterproscan
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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