Detailed information of Aala_g539.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4028178.1, Transposon Ty3-I Gag-Pol poly [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR039103FamilyCentrosomal protein Spd-2/CEP192Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR16029UNCHARACTERIZEDInterproscan
PTHR33064POL PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR35711EXPRESSED PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000242Cellular Componentpericentriolar materialInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0007099Biological Processcentriole replicationInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0051298Biological Processcentrosome duplicationInterproscan
GO:0071539Biological Processprotein localization to centrosomeInterproscan
GO:0090222Biological Processcentrosome-templated microtubule nucleationInterproscan
GO:0090307Biological Processmitotic spindle assemblyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03537POP5; ribonuclease P/MRP protein subunit POP5EC:3.1.26.5
Mitochondrial biogenesisko03029deepkoala

TOP