Detailed information of Aala_g550.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028395358.1, LOW QUALITY PROTEIN: fibrocystin-L-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80ZA4Fibrocystin-L OS=Mus musculus OX=10090 GN=Pkhd1l1 PE=1 SV=1
Q86WI1Fibrocystin-L OS=Homo sapiens OX=9606 GN=PKHD1L1 PE=1 SV=2
E2RK30Fibrocystin OS=Canis lupus familiaris OX=9615 GN=PKHD1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF01833TIGIPT/TIG domainDomainInterproscan
PF10162G8G8 domainDomainInterproscan
PF04130GCP_C_terminalGamma tubulin complex component C-terminalDomainInterproscan
PF14893PNMAPNMAFamilyInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02574S-methyl_transHomocysteine S-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR002909DomainIPT domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR019316DomainG8 domainInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR052387FamilyFibrocystin-related proteinInterproscan
IPR042241Homologous_superfamilyGamma-tubulin complex component, C-terminal domain superfamilyInterproscan
IPR007259FamilyGamma-tubulin complex component proteinInterproscan
IPR040457DomainGamma tubulin complex component, C-terminalInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR003968FamilyPotassium channel, voltage dependent, KvInterproscan
IPR005821DomainIon transport domainInterproscan
IPR045137FamilyRNA-binding protein 26/27Interproscan
IPR051524FamilyBetaine-homocysteine S-methyltransferaseInterproscan
IPR003726DomainHomocysteine-binding domainInterproscan
IPR036589Homologous_superfamilyHomocysteine-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR33504NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4Interproscan
PTHR46769POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1Interproscan
PTHR19302GAMMA TUBULIN COMPLEX PROTEINInterproscan
PTHR19963CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR14398RNA RECOGNITION RRM/RNP DOMAINInterproscan
PTHR46120BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0000923Cellular Componentequatorial microtubule organizing centerInterproscan
GO:0000930Cellular Componentgamma-tubulin complexInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0007020Biological Processmicrotubule nucleationInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0043015Molecular Functiongamma-tubulin bindingInterproscan
GO:0051011Molecular Functionmicrotubule minus-end bindingInterproscan
GO:0051225Biological Processspindle assemblyInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0047150Molecular Functionbetaine-homocysteine S-methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11126TERT, EST2; telomerase reverse transcriptaseEC:2.7.7.49
Cilium and associated proteinsko03037deepkoala
DNA replication proteinsko03032deepkoala

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