Detailed information of Aala_g551.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020613303.1, fibrocystin-L-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12874Splicing factor 3A subunit 3 OS=Homo sapiens OX=9606 GN=SF3A3 PE=1 SV=1
Q9D554Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2
Q6NRI5Splicing regulator SDE2 OS=Xenopus laevis OX=8355 GN=sde2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08389Xpo1Exportin 1-like proteinRepeatInterproscan
PF03810IBN_NImportin-beta N-terminal domainRepeatInterproscan
PF18773Importin_repImportin 13 repeatRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF01833TIGIPT/TIG domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001494DomainImportin-beta, N-terminal domainInterproscan
IPR051345FamilyImportin beta-like nuclear transport receptorsInterproscan
IPR013598DomainExportin-1/Importin-beta-likeInterproscan
IPR040709RepeatImportin 13, repeat 1Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR025086DomainSDE2-like, C-terminal domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR052387FamilyFibrocystin-related proteinInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002909DomainIPT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12363TRANSPORTIN 3 AND IMPORTIN 13Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR24240OPSINInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan
PTHR46769POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26529F2L; Poxviridae dUTP diphosphataseEC:3.6.1.23
Signaling proteins-deepkoala
Viral proteinsko03200deepkoala

TOP