Gene detail

Detailed information of Aala_g567.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCJ8736307.1, hypothetical protein [Pangasius djambal]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q03274	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
Q5RDG3	Presequence protease, mitochondrial OS=Pongo abelii OX=9601 GN=PITRM1 PE=2 SV=1
Q5JRX3	Presequence protease, mitochondrial OS=Homo sapiens OX=9606 GN=PITRM1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF05380	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF06565	DM10_dom	DM10 domain	Domain	Interproscan
PF20742	DUF5580_M	Family of unknown function (DUF5580) middle domain	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF05193	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan
PF08367	M16C_assoc	Peptidase M16C associated	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR008042	Family	Retrotransposon, Pao	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR014010	Domain	REJ domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR006602	Domain	DM10 domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR040193	Family	EF-hand domain-containing protein EFHC1/EFHC2/EFHB	Interproscan
IPR049246	Domain	DUF5580, middle domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR051165	Family	Multifunctional Ankyrin Repeat Domain-Containing Protein	Interproscan
IPR007863	Domain	Peptidase M16, C-terminal	Interproscan
IPR013578	Domain	Peptidase M16C associated	Interproscan
IPR011249	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR12086	EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24123	ANKYRIN REPEAT-CONTAINING	Interproscan
PTHR47202	HISTIDINE-RICH GLYCOPROTEIN	Interproscan
PTHR43016	PRESEQUENCE PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0000281	Biological Process	mitotic cytokinesis	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0010975	Biological Process	regulation of neuron projection development	Interproscan
GO:0043014	Molecular Function	alpha-tubulin binding	Interproscan
GO:0060285	Biological Process	cilium-dependent cell motility	Interproscan
GO:0072686	Cellular Component	mitotic spindle	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0016485	Biological Process	protein processing	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02956	RP-S15, MRPS15, rpsO; small subunit ribosomal protein S15	-	Membrane trafficking	ko04131	deepkoala
K02956	RP-S15, MRPS15, rpsO; small subunit ribosomal protein S15	-	Ribosome	ko03011	deepkoala