Detailed information of Aala_g596.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_022788054.1, DNA-directed RNA polymerase III subunit RPC6-like isoform X2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2T9S3DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus OX=9913 GN=POLR3F PE=2 SV=1
Q9H1D9DNA-directed RNA polymerase III subunit RPC6 OS=Homo sapiens OX=9606 GN=POLR3F PE=1 SV=1
Q921X6DNA-directed RNA polymerase III subunit RPC6 OS=Mus musculus OX=10090 GN=Polr3f PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05158RNA_pol_Rpc34RNA polymerase Rpc34 subunitFamilyInterproscan
PF13238AAA_18AAA domainDomainInterproscan
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan
PF07052Hep_59Hepatocellular carcinoma-associated antigen 59FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR037493FamilyExodeoxyribonuclease III-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR016049FamilyRNA polymerase Rpc34-likeInterproscan
IPR007832FamilyRNA polymerase Rpc34Interproscan
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR020618FamilyAdenylate kinase isoenzyme 6Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR050984FamilyGfo/Idh/MocA domain-containing proteinInterproscan
IPR010756FamilyTelomere length and silencing protein 1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43250EXODEOXYRIBONUCLEASE IIIInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12780RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATEDInterproscan
PTHR12595POS9-ACTIVATING FACTOR FAP7-RELATEDInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22604OXIDOREDUCTASESInterproscan
PTHR13486TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008311Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan
GO:0004017Molecular Functionadenylate kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18532AK6, FAP7; adenylate kinaseEC:2.7.4.3
Viral proteinsko03200deepkoala
Ribosome biogenesisko03009deepkoala

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