Detailed information of Aala_g605.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF2149657.1, unnamed protein product [Rotaria magnacalcarata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CV25Secreted RxLR effector protein 78 OS=Plasmopara viticola OX=143451 GN=RXLR78 PE=3 SV=1
Q9TU53Cubilin OS=Canis lupus familiaris OX=9615 GN=CUBN PE=1 SV=1
P42664Embryonic protein UVS.2 OS=Xenopus laevis OX=8355 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyPAX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431CUBCUB domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00292PAX'Paired box' domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00612IQIQ calmodulin-binding motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR050841FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR001523DomainPaired domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR043182DomainPaired DNA-binding domainInterproscan
IPR043565FamilyPAX familyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24251OVOCHYMASE-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45636PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24255COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATEDInterproscan
PTHR32295IQ-DOMAIN 5-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21812E5; Alphapapillomavirus protein E5-Transportersko02000deepkoala
Viral proteinsko03200deepkoala

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