Detailed information of Aala_g609.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_005989995.1, PREDICTED: mitochondrial import inner membrane translocase subunit TIM44 [Latimeria chalumnae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35857Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2
O35094Mitochondrial import inner membrane translocase subunit TIM44 OS=Rattus norvegicus OX=10116 GN=Timm44 PE=1 SV=1
O43615Mitochondrial import inner membrane translocase subunit TIM44 OS=Homo sapiens OX=9606 GN=TIMM44 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08423Rad51Rad51DomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF02825WWEWWE domainFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013632DomainDNA recombination and repair protein Rad51-like, C-terminalInterproscan
IPR020588DomainDNA recombination and repair protein RecA-like, ATP-binding domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR004170DomainWWE domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR028823FamilySodium leak channel NALCNInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46141SODIUM LEAK CHANNEL NON-SELECTIVE PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0000150Molecular FunctionDNA strand exchange activityInterproscan
GO:0000730Biological ProcessDNA recombinase assemblyInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0042148Biological ProcessDNA strand invasionInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0032224Biological Processpositive regulation of synaptic transmission, cholinergicInterproscan
GO:0032230Biological Processpositive regulation of synaptic transmission, GABAergicInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan

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