Detailed information of Aala_g614.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3045255.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13813Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens OX=9606 GN=SPTAN1 PE=1 SV=3
P16086Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2
P16546Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435SpectrinSpectrin repeatDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00856SETSET domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002017RepeatSpectrin repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR050168FamilyAAA ATPase domain-containing proteinInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR053201FamilyFlavunoidine biosynthesis N-methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR23077AAA-FAMILY ATPASEInterproscan
PTHR24178MOLTING PROTEIN MLT-4Interproscan
PTHR12350HISTONE-LYSINE N-METHYLTRANSFERASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0051973Biological Processobsolete positive regulation of telomerase activityInterproscan
GO:1990275Molecular Functionpreribosome bindingInterproscan
GO:0097543Cellular Componentciliary inversin compartmentInterproscan
GO:1904108Biological Processprotein localization to ciliary inversin compartmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14571RIX7, NVL; ribosome biogenesis ATPase-Ribosome biogenesisko03009deepkoala

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