Gene detail

Detailed information of Aala_g620.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031782155.1, neurexin-4 [Nasonia vitripennis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6R2W3	SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
Q9H040	DNA-dependent metalloprotease SPRTN OS=Homo sapiens OX=9606 GN=SPRTN PE=1 SV=2
A0A0G2L7I0	DNA-dependent metalloprotease SPRTN OS=Danio rerio OX=7955 GN=sprtn PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF08393	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF17771	ADAMTS_CR_2	ADAMTS cysteine-rich domain 2	Domain	Interproscan
PF00493	MCM	MCM P-loop domain	Domain	Interproscan
PF07247	AATase	Alcohol acetyltransferase	Family	Interproscan
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR044245	Family	SprT-like domain-containing protein Spartan	Interproscan
IPR042222	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR013602	Domain	Dynein heavy chain, linker	Interproscan
IPR042228	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR026983	Family	Dynein heavy chain	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR041645	Domain	ADAMTS, cysteine-rich domain 2	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR023213	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR001208	Domain	MCM domain	Interproscan
IPR010828	Family	Alcohol acetyltransferase/N-acetyltransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR018525	Conserved_site	Mini-chromosome maintenance, conserved site	Interproscan
IPR031327	Family	Mini-chromosome maintenance protein	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001791	Domain	Laminin G domain	Interproscan
IPR050372	Family	Neurexin-related cell adhesion and synaptic protein	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21220	UNCHARACTERIZED	Interproscan
PTHR10676	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR11630	DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER	Interproscan
PTHR15036	PIKACHURIN-LIKE PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0031593	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008569	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060294	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729	Cellular Component	9+2 motile cilium	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0017116	Molecular Function	single-stranded DNA helicase activity	Interproscan
GO:0042555	Cellular Component	MCM complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan