Detailed information of Aala_g623.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3997408.1, nuclear factor 1 A-type isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P14057Nuclear factor 1 (Fragment) OS=Sus scrofa OX=9823 GN=NFI PE=1 SV=1
P70255Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1
Q90932Nuclear factor 1 X-type OS=Gallus gallus OX=9031 GN=NFIX PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10524NfI_DNAbd_pre-NNuclear factor I protein pre-N-terminusFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan
PF04500FLYWCHFLYWCH zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019548DomainCTF transcription factor/nuclear factor 1, N-terminalInterproscan
IPR000647FamilyCTF transcription factor/nuclear factor 1Interproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR020604DomainCTF transcription factor/nuclear factor 1, DNA-binding domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR007588DomainZinc finger, FLYWCH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11492NUCLEAR FACTOR IInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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